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	ZH: remove beacon from traces before da_reconstruction
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		|  | @ -74,8 +74,10 @@ if __name__ == "__main__": | |||
|     for i, ant in enumerate(ev.antennas): | ||||
|         # t_AxB will be set by the rit.set_pol_and_bp function | ||||
|         ev.antennas[i].t += measured_repair_offsets[i] | ||||
|         ev.antennas[i].t_AxB += measured_repair_offsets[i] | ||||
| 
 | ||||
|         # .. and remove the beacon from the traces | ||||
|         # Note: ant.E_AxB is recalculated by rit.set_pol_and_bp | ||||
|         if remove_beacon_from_traces: | ||||
|             clock_phase = measured_repair_offsets[i]*2*np.pi*f_beacon | ||||
| 
 | ||||
|  | @ -96,6 +98,66 @@ if __name__ == "__main__": | |||
|                 elif j == 2: | ||||
|                     ev.antennas[i].Ez -= amp*(1/tx_amps_sum)*calc_beacon | ||||
| 
 | ||||
|             # Subtract the beacon from E_AxB | ||||
|             ev.antennas[i].E_AxB -= calc_beacon | ||||
| 
 | ||||
|             ## | ||||
|             ## Make a figure of the manipulated traces | ||||
|             ## | ||||
|             if i == 2: | ||||
|                 orig_beacon_amplifier = ampl_AxB/max(ant.beacon) | ||||
| 
 | ||||
|                 for k in range(2): | ||||
|                     if k == 0: | ||||
|                         time = ant.t_AxB | ||||
|                         trace = ant.E_AxB | ||||
|                         tmp_beacon = calc_beacon | ||||
|                         fname_extra = "" | ||||
|                     else: | ||||
|                         time = ant.t | ||||
|                         trace = ant.Ex | ||||
|                         tmp_beacon = tx_amps[0]/tx_amps_sum * calc_beacon | ||||
|                         fname_extra = ".Ex" | ||||
| 
 | ||||
|                     fig, ax = plt.subplots() | ||||
|                     ax.set_title(f"Signal and Beacon traces Antenna {i}") | ||||
|                     ax.set_xlabel("Time [ns]") | ||||
|                     ax.set_ylabel("Amplitude [$\\mu V/m$]") | ||||
| 
 | ||||
|                     ax.plot(time, trace + tmp_beacon, alpha=0.6, ls='dashed', label='Signal') # calc_beacon was already removed | ||||
|                     ax.plot(time, tmp_beacon,        alpha=0.6, ls='dashed', label='Calc Beacon') | ||||
|                     ax.plot(time, trace,             alpha=0.6,              label="Signal - Calc Beacon") | ||||
| 
 | ||||
|                     if k == 0: | ||||
|                         ax.legend() | ||||
|                     else: | ||||
|                         ax.legend(title="Ex") | ||||
| 
 | ||||
|                     # save | ||||
|                     if fig_dir: | ||||
|                         fig.tight_layout() | ||||
| 
 | ||||
|                         if True: # zoom | ||||
|                             old_xlim = ax.get_xlim() | ||||
| 
 | ||||
|                             if True: # zoomed on part without peak of this trace | ||||
|                                 wx, x = 100, 100 | ||||
|                                 ax.set_xlim(x-wx, x+wx) | ||||
| 
 | ||||
|                                 fig.savefig(path.join(fig_dir, __file__+f'.traces.A{i}.zoomed.beacon{fname_extra}.pdf')) | ||||
| 
 | ||||
|                             if True: # zoomed on peak of this trace | ||||
|                                 idx = np.argmax(ev.antennas[i].E_AxB) | ||||
|                                 x = ev.antennas[i].t_AxB[idx] | ||||
|                                 wx = 100 | ||||
|                                 ax.set_xlim(x-wx, x+wx) | ||||
|                                 fig.savefig(path.join(fig_dir, __file__+f".traces.A{i}.zoomed.peak{fname_extra}.pdf")) | ||||
| 
 | ||||
|                             ax.set_xlim(*old_xlim) | ||||
| 
 | ||||
|                         fig.savefig(path.join(fig_dir, __file__+f'.traces.A{i}.pdf')) | ||||
| 
 | ||||
| 
 | ||||
|     N_X, Xlow, Xhigh = 23, 100, 1200 | ||||
|     with joblib.parallel_backend("loky"): | ||||
|         res = rit.reconstruction(ev, outfile=fig_subdir+'/fig.pdf', slice_outdir=fig_subdir+'/', Xlow=Xlow, N_X=N_X, Xhigh=Xhigh) | ||||
|  |  | |||
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