#!/usr/bin/env python3 # vim: fdm=indent ts=4 """ Find beacon phases in antenna traces And save these to a file """ import h5py import matplotlib.pyplot as plt import numpy as np import aa_generate_beacon as beacon import lib if __name__ == "__main__": from os import path import sys import matplotlib import os if os.name == 'posix' and "DISPLAY" not in os.environ: matplotlib.use('Agg') from scriptlib import MyArgumentParser parser = MyArgumentParser() parser.add_argument('--no-use-AxB', dest='use_AxB_trace', action='store_false') args = parser.parse_args() f_beacon_band = (49e-3,55e-3) #GHz allow_frequency_fitting = False read_frequency_from_file = True use_AxB_trace = args.use_AxB_trace use_beacon_trace = True # only applicable if AxB = False show_plots = args.show_plots fname = "ZH_airshower/mysim.sry" print("use_AxB_trace:", use_AxB_trace, "use_beacon_trace:",use_beacon_trace) #### fname_dir = path.dirname(fname) antennas_fname = path.join(fname_dir, beacon.antennas_fname) fig_dir = args.fig_dir # set None to disable saving if not path.isfile(antennas_fname): print("Antenna file cannot be found, did you try generating a beacon?") sys.exit(1) # read in antennas with h5py.File(antennas_fname, 'a') as fp: if 'antennas' not in fp.keys(): print("Antenna file corrupted? no antennas") sys.exit(1) group = fp['antennas'] f_beacon = None if read_frequency_from_file and 'tx' in fp: tx = fp['tx'] if 'f_beacon' in tx.attrs: f_beacon = tx.attrs['f_beacon'] else: print("No frequency found in file.") sys.exit(2) f_beacon_estimate_band = 0.01*f_beacon elif allow_frequency_fitting: f_beacon_estimate_band = (f_beacon_band[1] - f_beacon_band[0])/2 f_beacon = f_beacon_band[1] - f_beacon_estimate_band else: print("Not allowed to fit frequency and no tx group found in file.") sys.exit(2) N_antennas = len(group.keys()) # just for funzies found_data = np.zeros((N_antennas, 3)) # Determine frequency and phase for i, name in enumerate(group.keys()): h5ant = group[name] # use E_AxB only instead of polarisations if use_AxB_trace: if 'E_AxB' not in h5ant.keys(): print(f"Antenna does not have 'E_AxB' in {name}") sys.exit(1) traces = h5ant['E_AxB'] t_trace = traces[0] test_traces = [ traces[1] ] orients = ['E_AxB'] # TODO: refine masking # use beacon but remove where E_AxB-Beacon != 0 if True: if not True: t_mask = np.isclose(h5ant['E_AxB'][1], h5ant['traces'][4], rtol=1e-3, atol=1e-3) else: t_mask = np.ones(len(t_trace), dtype=bool) t_mask[1500:3000] = False # magic numbers from aa_generate_beacon t_trace = t_trace[t_mask] for j, t in enumerate(test_traces): test_traces[j] = t[t_mask] orients[j] = orients[j] + ' masked' # use separate polarisations else: if 'traces' not in h5ant.keys(): print(f"Antenna file corrupted? no 'traces' in {name}") sys.exit(1) traces = h5ant['traces'] t_trace = traces[0] if use_beacon_trace: # only take the Beacon trace test_traces = [traces[4]] orients = ['B'] else: test_traces = traces[1:] orients = ['Ex', 'Ey', 'Ez', 'B'] # modify the length of the traces if False: t_trace = t_trace[:len(t_trace)//2] half_traces = [] for trace in test_traces: half_traces.append( trace[:len(trace)//2]) test_traces = half_traces # Do Fourier Transforms # to find phases and amplitudes if True: freqs, phases, amps = lib.find_beacon_in_traces( test_traces, t_trace, f_beacon_estimate=f_beacon, frequency_fit=allow_frequency_fitting, f_beacon_estimate_band=f_beacon_estimate_band ) else: # Testing freqs = [f_beacon] t0 = h5ant.attrs['t0'] phases = [ 2*np.pi*t0*f_beacon ] amps = [ 3e-7 ] # choose highest amp idx = 0 if False and len(phases) > 1: #idx = np.argmax(amplitudes, axis=-1) raise NotImplementedError frequency = freqs[idx] phase = phases[idx] amplitude = amps[idx] orientation = orients[idx] # Correct for phase by t_trace[0] corr_phase = lib.phase_mod(2*np.pi*f_beacon*t_trace[0]) if False: # Subtract phase due to not starting at t=0 # This is already done in beacon_find_traces phase = lib.phase_mod(phase + corr_phase) # for reporting using plots found_data[i] = frequency, phase, amplitude if (show_plots or fig_dir) and (i == 0 or i == 72 or i == 70): p2t = lambda phase: phase/(2*np.pi*f_beacon) fig, ax = plt.subplots() ax.set_title(f"Beacon at antenna {h5ant.attrs['name']}\nF:{frequency:.2e}, P:{phase:.4f}, A:{amplitude:.1e}") ax.set_xlabel("t [ns]") ax.set_ylabel("Amplitude") if True: # let the trace start at t=0 t_0 = min(t_trace) extra_phase = corr_phase else: t_0 = 0 extra_phase = -1*corr_phase for j, trace in enumerate(test_traces): ax.plot(t_trace - t_0, test_traces[j], marker='.', label='trace '+orients[j]) myt = np.linspace(min(t_trace), max(t_trace), 10*len(t_trace)) - t_0 ax.plot(myt, lib.sine_beacon(frequency, myt, amplitude=amplitude, t0=0, phase=phase+extra_phase), ls='dotted', label='simulated beacon') ax.axvline( p2t(lib.phase_mod(-1*(phase+extra_phase), low=0)), color='r', ls='dashed', label='$t_\\varphi$') ax.axvline(0,color='grey',alpha=0.5) ax.axhline(0,color='grey',alpha=0.5) ax.legend() if fig_dir: old_xlims = ax.get_xlim() ax.set_xlim(min(t_trace)-t_0-10,min(t_trace)-t_0+40) fig.savefig(path.join(fig_dir, path.basename(__file__) + f".A{h5ant.attrs['name']}.zoomed.pdf")) ax.set_xlim(*old_xlims) fig.savefig(path.join(fig_dir, path.basename(__file__) + f".A{h5ant.attrs['name']}.pdf")) # save to file h5beacon_info = h5ant.require_group('beacon_info') # only take n_sig significant digits into account # for naming in hdf5 file n_sig = 3 decimal = int(np.floor(np.log10(abs(frequency)))) freq_name = str(np.around(frequency, n_sig-decimal)) # delete previous values if freq_name in h5beacon_info: del h5beacon_info[freq_name] h5beacon_freq_info = h5beacon_info.create_group(freq_name) h5attrs = h5beacon_freq_info.attrs h5attrs['freq'] = frequency h5attrs['phase'] = phase h5attrs['amplitude'] = amplitude h5attrs['orientation'] = orientation print("Beacon Phases, Amplitudes and Frequencies written to", antennas_fname) # show histogram of found frequencies if show_plots or fig_dir: if True or allow_frequency_fitting: fig, ax = plt.subplots() ax.set_xlabel("Frequency") ax.set_ylabel("Counts") ax.axvline(f_beacon, ls='dashed', color='g') ax.hist(found_data[:,0], bins='sqrt', density=False) if fig_dir: fig.savefig(path.join(fig_dir, path.basename(__file__) + f".hist_freq.pdf")) if True: fig, ax = plt.subplots() ax.set_xlabel("Amplitudes") ax.set_ylabel("Counts") ax.hist(found_data[:,2], bins='sqrt', density=False) if fig_dir: fig.savefig(path.join(fig_dir, path.basename(__file__) + f".hist_amp.pdf")) if show_plots: plt.show()