ericteunis/m-thesis-introduction
1
0
Fork 0
mirror of https://gitlab.science.ru.nl/mthesis-edeboone/m-thesis-introduction.git synced 2024-12-22 11:33:32 +01:00
Code Issues Projects Releases Packages Wiki Activity

Merge branch 'more-makefile' into main

Browse source 
It allows to modify a config.mk to set variables across scripts.
This commit is contained in:
Eric Teunis de Boone 2023-02-03 14:37:20 +01:00
commit a91fe04533
18 changed files with 209 additions and 131 deletions
Show stats Download patch file Download diff file Expand all files Collapse all files

3
simulations/airshower_beacon_simulation/.gitignore vendored Normal file
View file

@ -0,0 +1,3 @@
config.mk
figures
data

64
simulations/airshower_beacon_simulation/Makefile
View file

@ -1,35 +1,61 @@
.PHONY: all
FIG_DIR := ./figures
all: beacon clocks phases findks reconstruct
-include config.mk
MAX_K ?= 3
CLK_DEV ?= 20
TRACE_N ?= 4096
TRACE_PRE ?= 500
NOISE_SIGMA ?= 1e4
BEAC_AMP ?= 1e3 0 0
BEAC_F ?= 51.53e-3
BEAC_DECAY ?= 0
PB_LOW ?= 0.03
PB_HIGH ?= 0.08
REF_ANTS ?=
N_MASK ?= 500
DATA_DIR ?= ./data
INPUT_DIR ?= ./ZH_airshower/
SEED ?= 12345
all: beacon clocks phases findks vary-fixes reconstruct
beacon:
./aa_generate_beacon.py | tee figures/aa.log
./ab_modify_clocks.py 0 | tee figures/ab.log
./ac_show_signal_to_noise.py --no-show-plots --fig-dir=${FIG_DIR}
./view_beaconed_antenna.py 72 -p x -p y -p z --no-show-plots --fig-dir=${FIG_DIR}
./aa_generate_beacon.py -N ${TRACE_N} -P ${TRACE_PRE} -n ${NOISE_SIGMA} -a ${BEAC_AMP} -f ${BEAC_F} -l ${PB_LOW} -u ${PB_HIGH} -d ${BEAC_DECAY} --data-dir ${DATA_DIR} --input-fname ${INPUT_DIR} | tee ${FIG_DIR}/aa.log
./ab_modify_clocks.py 0 --data-dir ${DATA_DIR} | tee ${FIG_DIR}/ab.log
./ac_show_signal_to_noise.py --no-show-plots --fig-dir=${FIG_DIR} --data-dir ${DATA_DIR}
./view_beaconed_antenna.py 72 -p x -p y -p z -p n -p b --ft --no-show-plots --fig-dir=${FIG_DIR} --data-dir ${DATA_DIR}
clocks:
./ab_modify_clocks.py 15 --gaussian
./ab_modify_clocks.py ${CLK_DEV} --seed ${SEED} --gaussian --data-dir ${DATA_DIR}
phases:
./ba_measure_beacon_phase.py --no-show-plots --fig-dir=${FIG_DIR}
./bb_measure_clock_phase.py --no-show-plots --fig-dir=${FIG_DIR}
./bc_baseline_phase_deltas.py --no-show-plots --fig-dir=${FIG_DIR}
./bd_antenna_phase_deltas.py --no-show-plots --fig-dir=${FIG_DIR}
./ba_measure_beacon_phase.py --N-mask ${N_MASK} --no-show-plots --fig-dir=${FIG_DIR} --data-dir ${DATA_DIR}
./bb_measure_clock_phase.py --no-show-plots --fig-dir=${FIG_DIR} --data-dir ${DATA_DIR}
./bc_baseline_phase_deltas.py ${REF_ANTS} --no-show-plots --fig-dir=${FIG_DIR} --data-dir ${DATA_DIR}
./bd_antenna_phase_deltas.py --no-show-plots --fig-dir=${FIG_DIR} --data-dir ${DATA_DIR}
findks:
./ca_period_from_shower.py --no-show-plots --fig-dir=${FIG_DIR}
./cb_report_measured_antenna_time_offsets.py --no-show-plots --fig-dir=${FIG_DIR}
./ca_period_from_shower.py --input-fname ${INPUT_DIR} --max-k ${MAX_K} --no-show-plots --fig-dir=${FIG_DIR} --data-dir ${DATA_DIR} -l ${PB_LOW} -u ${PB_HIGH}
./cb_report_measured_antenna_time_offsets.py --no-show-plots --fig-dir=${FIG_DIR} --data-dir ${DATA_DIR}
vary-fixes:
./dc_grid_power_time_fixes.py --no-show-plots --fig-dir=${FIG_DIR} --data-dir ${DATA_DIR} --input-fname ${INPUT_DIR}
reconstruct:
./da_reconstruction.py --no-show-plots --fig-dir=${FIG_DIR}
./db_longitudinal_figure.py --no-show-plots --fig-dir=${FIG_DIR}
./dc_grid_power_time_fixes.py --no-show-plots --fig-dir=${FIG_DIR}
./da_reconstruction.py --no-show-plots --fig-dir=${FIG_DIR} --data-dir ${DATA_DIR} --input-fname ${INPUT_DIR}
./db_longitudinal_figure.py --no-show-plots --fig-dir=${FIG_DIR} --data-dir ${DATA_DIR}
dist-clean:
rm -f ZH_airshower/antennas.hdf5
rm -f ZH_airshower/clocks.csv
rm -f ZH_airshower/tx.json
rm -vf ${DATA_DIR}/antennas.hdf5
rm -vf ${DATA_DIR}/ca_breaked_run
rm -vf ${DATA_DIR}/res.pkl
rm -vf ${DATA_DIR}/clocks.csv
rm -vf ${DATA_DIR}/tx.json

20
simulations/airshower_beacon_simulation/aa_generate_beacon.py
View file

@ -282,23 +282,31 @@ if __name__ == "__main__":
# Bandpass
parser.add_argument('-p', '--use-passband', type=bool, default=True, help='(Default: %(default)d)')
parser.add_argument('-l', '--passband-low', type=float, default=30e-3, help='Lower frequency [GHz] of the passband filter. (set -1 for np.inf) (Default: %(default)d)')
parser.add_argument('-u', '--passband-high', type=float, default=80e-3, help='Upper frequency [GHz] of the passband filter. (set -1 for np.inf) (Default: %(default)d)')
parser.add_argument('-l', '--passband-low', type=float, default=30e-3, help='Lower frequency [GHz] of the passband filter. (set -1 for np.inf) (Default: %(default)g)')
parser.add_argument('-u', '--passband-high', type=float, default=80e-3, help='Upper frequency [GHz] of the passband filter. (set -1 for np.inf) (Default: %(default)g)')
# Trace length modification
parser.add_argument('-N', '--new-trace-length', type=float, help='resize airshower trace (Default: %(default)d)', default=1e4)
parser.add_argument('-P', '--pre-trace-length', type=float, help='amount of trace to prepend the airshower when resizing (Default: %(default)d)', default=2e3)
# Input directory
parser.add_argument('--input-fname', type=str, default=None, help='Path to mysim.sry, either directory or path. If empty it takes DATA_DIR and appends mysim.sry. (Default: %(default)s)')
parser.add_argument('--data-dir', type=str, default="./ZH_airshower", help='Path to Data Directory. (Default: %(default)s)')
args = parser.parse_args()
if not args.input_fname:
args.input_fname = args.data_dir
if path.isdir(args.input_fname):
args.input_fname = path.join(args.input_fname, "mysim.sry")
##
## End of ArgumentParsing
##
rng = np.random.default_rng()
fname = "ZH_airshower/mysim.sry"
# Noise properties
noise_sigma = args.noise_sigma # mu V/m set to None to ignore
@ -337,7 +345,7 @@ if __name__ == "__main__":
block_filter = lambda x, dt, low, high: x
####
fname_dir = path.dirname(fname)
fname_dir = args.data_dir
tx_fname = path.join(fname_dir, tx_fname)
antennas_fname = path.join(fname_dir, antennas_fname)
@ -354,7 +362,7 @@ if __name__ == "__main__":
print("Noise sigma [muV/m]:", noise_sigma)
# read in antennas
ev = REvent(fname)
ev = REvent(args.input_fname)
N_antennas = len(ev.antennas)
# initialize hdf5 file

9
simulations/airshower_beacon_simulation/ab_modify_clocks.py
View file

@ -23,22 +23,23 @@ if __name__ == "__main__":
parser = ArgumentParser()
parser.add_argument('max_clock_offset', nargs='?', type=float, default=25, help='(Default: %(default)d)')
parser.add_argument('-s', '--seed', type=int, nargs='?', default=None, help='Fix seed if supplied.')
parser.add_argument('--uniform', action='store_const', const='uniform', dest='dist_type')
parser.add_argument('--gaussian', action='store_const', const='gauss', dest='dist_type')
parser.set_defaults(dist_type='gauss')
parser.add_argument('--data-dir', type=str, default="./data", help='Path to Data Directory. (Default: %(default)s)')
args = parser.parse_args()
max_clock_offset = args.max_clock_offset # ns
remake_clock_offsets = True
seed = 12345
seed = args.seed
rng = np.random.default_rng(seed)
fname = "ZH_airshower/mysim.sry"
####
fname_dir = path.dirname(fname)
fname_dir = args.data_dir
clocks_fname = path.join(fname_dir, clocks_fname)
antennas_fname = path.join(fname_dir, beacon.antennas_fname)

5
simulations/airshower_beacon_simulation/ac_show_signal_to_noise.py
View file

@ -33,14 +33,13 @@ if __name__ == "__main__":
args = parser.parse_args()
fname = "ZH_airshower/mysim.sry"
figsize = (9,6)
figsize = (12,8)
fig_dir = args.fig_dir
show_plots = args.show_plots
####
fname_dir = path.dirname(fname)
fname_dir = args.data_dir
antennas_fname = path.join(fname_dir, beacon.antennas_fname)
tx_fname = path.join(fname_dir, beacon.tx_fname)

93
simulations/airshower_beacon_simulation/ba_measure_beacon_phase.py
View file

@ -23,25 +23,31 @@ if __name__ == "__main__":
from scriptlib import MyArgumentParser
parser = MyArgumentParser()
parser.add_argument('--no-use-AxB', dest='use_AxB_trace', action='store_false')
group1 = parser.add_mutually_exclusive_group()
group1.add_argument('--AxB', dest='use_AxB_trace', action='store_true', help='Only use AxB trace, if both AxB and beacon are not used, we use the antenna polarisations.')
group1.add_argument('--beacon', dest='use_beacon_trace', action='store_true', help='Only use the beacon trace')
parser.add_argument('--N-mask', type=float, default=500, help='Mask N_MASK samples around the absolute maximum of the trace. (Default: %(default)d)')
args = parser.parse_args()
f_beacon_band = (49e-3,55e-3) #GHz
allow_frequency_fitting = False
read_frequency_from_file = True
N_mask = int(args.N_mask)
use_AxB_trace = args.use_AxB_trace
use_beacon_trace = True # only applicable if AxB = False
use_only_AxB_trace = args.use_AxB_trace
use_only_beacon_trace = args.use_beacon_trace # only applicable if AxB = False
show_plots = args.show_plots
fname = "ZH_airshower/mysim.sry"
figsize = (9,6)
figsize = (12,8)
print("use_AxB_trace:", use_AxB_trace, "use_beacon_trace:",use_beacon_trace)
print("use_only_AxB_trace:", use_only_AxB_trace, "use_only_beacon_trace:", use_only_beacon_trace)
####
fname_dir = path.dirname(fname)
fname_dir = args.data_dir
antennas_fname = path.join(fname_dir, beacon.antennas_fname)
fig_dir = args.fig_dir # set None to disable saving
@ -84,21 +90,51 @@ if __name__ == "__main__":
h5ant = group[name]
# use E_AxB only instead of polarisations
if use_AxB_trace:
if 'E_AxB' not in h5ant.keys():
print(f"Antenna does not have 'E_AxB' in {name}")
if use_only_AxB_trace:
traces_key = 'E_AxB'
if traces_key not in h5ant.keys():
print(f"Antenna does not have '{traces_key}' in {name}")
sys.exit(1)
traces = h5ant['E_AxB']
traces = h5ant[traces_key]
t_trace = traces[0]
test_traces = [ traces[1] ]
orients = ['E_AxB']
# Only beacon
elif use_only_beacon_trace:
traces_key = 'filtered_traces'
if traces_key not in h5ant.keys():
print(f"Antenna file corrupted? no '{traces_key}' in {name}")
sys.exit(1)
traces = h5ant[traces_key]
t_trace = traces[0]
test_traces = [traces[4]]
orients = ['B']
# use separate polarisations
else:
traces_key = 'filtered_traces'
if traces_key not in h5ant.keys():
print(f"Antenna file corrupted? no '{traces_key}' in {name}")
sys.exit(1)
traces = h5ant[traces_key]
t_trace = traces[0]
test_traces = [traces[i] for i in range(1,4)]
orients = ['Ex', 'Ey', 'Ez']
# Really only select the first component
if True:
test_traces = [test_traces[0]]
orients = [orients[0]]
# TODO: refine masking
# use beacon but remove where E_AxB-Beacon != 0
if True:
N_pre, N_post = 250, 250 # TODO: make this configurable
# Uses the first traces as reference
if N_mask and orients[0] != 'B':
N_pre, N_post = N_mask//2, N_mask//2
max_idx = np.argmax(test_traces[0])
@ -113,31 +149,6 @@ if __name__ == "__main__":
test_traces[j] = t[t_mask]
orients[j] = orients[j] + ' masked'
# use separate polarisations
else:
if 'traces' not in h5ant.keys():
print(f"Antenna file corrupted? no 'traces' in {name}")
sys.exit(1)
traces = h5ant['traces']
t_trace = traces[0]
if use_beacon_trace:
# only take the Beacon trace
test_traces = [traces[4]]
orients = ['B']
else:
test_traces = traces[1:]
orients = ['Ex', 'Ey', 'Ez', 'B']
# modify the length of the traces
if False:
t_trace = t_trace[:len(t_trace)//2]
half_traces = []
for trace in test_traces:
half_traces.append( trace[:len(trace)//2])
test_traces = half_traces
# Do Fourier Transforms
# to find phases and amplitudes
if True:
@ -156,7 +167,7 @@ if __name__ == "__main__":
amps = [ 3e-7 ]
# choose highest amp
idx = 0
idx = np.argmax(amps)
if False and len(beacon_phases) > 1:
#idx = np.argmax(amplitudes, axis=-1)
raise NotImplementedError
@ -176,7 +187,7 @@ if __name__ == "__main__":
# for reporting using plots
found_data[i] = frequency, beacon_phase, amplitude
if (show_plots or fig_dir) and (i == 0 or i == 72 or i == 70):
if (show_plots or fig_dir) and (i == 0 or i == 72):
p2t = lambda phase: phase/(2*np.pi*f_beacon)
fig, ax = plt.subplots(figsize=figsize)

5
simulations/airshower_beacon_simulation/bb_measure_clock_phase.py
View file

@ -22,8 +22,7 @@ if __name__ == "__main__":
parser = MyArgumentParser()
args = parser.parse_args()
fname = "ZH_airshower/mysim.sry"
figsize = (9,6)
figsize = (12,8)
c_light = lib.c_light
show_plots = args.show_plots
@ -31,7 +30,7 @@ if __name__ == "__main__":
remove_absolute_phase_offset_minimum = True
####
fname_dir = path.dirname(fname)
fname_dir = args.data_dir
antennas_fname = path.join(fname_dir, beacon.antennas_fname)
fig_dir = args.fig_dir # set None to disable saving

23
simulations/airshower_beacon_simulation/bc_baseline_phase_deltas.py
View file

@ -21,16 +21,16 @@ if __name__ == "__main__":
from scriptlib import MyArgumentParser
parser = MyArgumentParser()
parser.add_argument('ref_ant_idx', default=None, nargs='*', type=int, help='Reference Antenna Indices for Baselines(ref_ant_idx, *). Leave empty to use all available antennas. (Default: %(default)s) ')
args = parser.parse_args()
fname = "ZH_airshower/mysim.sry"
figsize = (9,6)
figsize = (12,8)
c_light = 3e8*1e-9
show_plots = args.show_plots
ref_ant_id = None if True else [50] # leave None for all baselines
ref_ant_id = args.ref_ant_idx # leave None for all baselines
####
fname_dir = path.dirname(fname)
fname_dir = args.data_dir
antennas_fname = path.join(fname_dir, beacon.antennas_fname)
time_diffs_fname = 'time_diffs.hdf5' if False else antennas_fname
@ -44,14 +44,15 @@ if __name__ == "__main__":
f_beacon, tx, antennas = beacon.read_beacon_hdf5(antennas_fname)
# run over all baselines
if ref_ant_id is None:
if not ref_ant_id:
print("Doing all baselines")
baselines = list(combinations(antennas,2))
baselines = combinations(antennas,2)
# use ref_ant
else:
ref_ants = [antennas[i] for i in ref_ant_id]
print("Doing all baselines with {}".format([int(a.name) for a in ref_ants]))
baselines = list(product(ref_ants, antennas))
baselines = product(ref_ants, antennas)
# For now, only one beacon_frequency is supported
freq_names = antennas[0].beacon_info.keys()
@ -60,7 +61,11 @@ if __name__ == "__main__":
freq_name = next(iter(freq_names))
# Collect baselines from optional generators
baselines = list(baselines)
# Get phase difference per baseline
phase_diffs = np.empty( (len(baselines), 2) )
for i, base in enumerate(baselines):
if i%1000==0:
@ -116,10 +121,10 @@ if __name__ == "__main__":
if plot_residuals:
phase_residuals = lib.phase_mod(phase_diffs[:,1] - my_phase_diffs)
fig.suptitle("Difference between Measured and Actual phase difference\n for Baselines (i,j" + (')' if ref_ant_id is None else '='+str([ int(a.name) for a in ref_ants])+')'))
fig.suptitle("Difference between Measured and Actual phase difference\n for Baselines (i,j" + (')' if not ref_ant_id else '='+str([ int(a.name) for a in ref_ants])+')'))
axs[-1].set_xlabel("Baseline Phase Residual $\\Delta\\varphi_{ij_{meas}} - \\Delta\\varphi_{ij_{true}}$ [rad]")
else:
fig.suptitle("Comparison Measured and Actual phase difference\n for Baselines (i,j" + (')' if ref_ant_id is None else '='+str([ int(a.name) for a in ref_ants])+')'))
fig.suptitle("Comparison Measured and Actual phase difference\n for Baselines (i,j" + (')' if not ref_ant_id else '='+str([ int(a.name) for a in ref_ants])+')'))
axs[-1].set_xlabel("Baseline Phase $\\Delta\\varphi_{ij}$ [rad]")

5
simulations/airshower_beacon_simulation/bd_antenna_phase_deltas.py
View file

@ -25,14 +25,13 @@ if __name__ == "__main__":
parser = MyArgumentParser()
args = parser.parse_args()
fname = "ZH_airshower/mysim.sry"
figsize = (9,6)
figsize = (12,8)
show_plots = args.show_plots
ref_ant_id = None # leave None for all baselines
####
fname_dir = path.dirname(fname)
fname_dir = args.data_dir
antennas_fname = path.join(fname_dir, beacon.antennas_fname)
time_diffs_fname = 'time_diffs.hdf5' if False else antennas_fname
fig_dir = args.fig_dir # set None to disable saving

35
simulations/airshower_beacon_simulation/ca_period_from_shower.py
View file

@ -151,11 +151,24 @@ if __name__ == "__main__":
from scriptlib import MyArgumentParser
parser = MyArgumentParser(default_fig_dir="./figures/periods_from_shower_figures/")
parser.add_argument('--quick_run', action='store_true', help='Use a very coarse grid (6x6)')
parser.add_argument('--max-k', type=float, default=2, help='Maximum abs(k) allowed to be shifted. (Default: %(default)d)')
parser.add_argument('-N', '--N_runs', type=int, default=5, help='Maximum amount of iterations to grid search. (Default: %(default)d)')
parser.add_argument('-l', '--passband-low', type=float, default=30e-3, help='Lower frequency [GHz] of the passband filter. (set -1 for np.inf) (Default: %(default)g)')
parser.add_argument('-u', '--passband-high', type=float, default=80e-3, help='Upper frequency [GHz] of the passband filter. (set -1 for np.inf) (Default: %(default)g)')
parser.add_argument('--input-fname', type=str, default=None, help='Path to mysim.sry, either directory or path. If empty it takes DATA_DIR and appends mysim.sry. (Default: %(default)s)')
args = parser.parse_args()
fname = "ZH_airshower/mysim.sry"
figsize = (9,6)
if not args.input_fname:
args.input_fname = args.data_dir
if path.isdir(args.input_fname):
args.input_fname = path.join(args.input_fname, "mysim.sry")
figsize = (12,8)
fig_dir = args.fig_dir
fig_subdir = path.join(fig_dir, 'shifts/')
@ -165,12 +178,15 @@ if __name__ == "__main__":
allowed_ks = np.arange(-max_k, max_k+1, dtype=int)
Xref = 400
N_runs = 3
N_runs = args.N_runs
remove_beacon_from_trace = True
apply_signal_window_from_max = True
low_bp = args.passband_low if args.passband_low >= 0 else np.inf # GHz
high_bp = args.passband_high if args.passband_high >= 0 else np.inf # GHz
####
fname_dir = path.dirname(fname)
fname_dir = args.data_dir
antennas_fname = path.join(fname_dir, beacon.antennas_fname)
time_diffs_fname = 'time_diffs.hdf5' if not True else antennas_fname
@ -188,7 +204,7 @@ if __name__ == "__main__":
# Read in antennas from file
_, tx, antennas = beacon.read_beacon_hdf5(antennas_fname)
# Read original REvent
ev = REvent(fname)
ev = REvent(args.input_fname)
# .. patch in our antennas
ev.antennas = antennas
@ -201,7 +217,7 @@ if __name__ == "__main__":
f_beacon = ev.antennas[0].beacon_info[freq_name]['freq']
# Prepare polarisation and passbands
rit.set_pol_and_bp(ev, low=0.03, high=0.08)
rit.set_pol_and_bp(ev, low=low_bp, high=high_bp)
##
## Manipulate time and traces of each antenna
@ -297,14 +313,13 @@ if __name__ == "__main__":
scale2d = dXref*np.tan(np.deg2rad(2.))
scale4d = dXref*np.tan(np.deg2rad(4.))
if False: #quicky
x_coarse = np.linspace(-scale2d, scale2d, 4)
y_coarse = np.linspace(-scale2d, scale2d, 4)
if args.quick_run: #quicky
x_coarse = np.linspace(-scale2d, scale2d, 6)
y_coarse = np.linspace(-scale2d, scale2d, 6)
x_fine = x_coarse/4
y_fine = y_coarse/4
else: # long
N_runs = 5
x_coarse = np.linspace(-scale4d, scale4d, 40)
y_coarse = np.linspace(-scale4d, scale4d, 40)

5
simulations/airshower_beacon_simulation/cb_report_measured_antenna_time_offsets.py
View file

@ -22,14 +22,13 @@ if __name__ == "__main__":
parser = MyArgumentParser()
args = parser.parse_args()
fname = "ZH_airshower/mysim.sry"
figsize = (9,6)
figsize = (12,8)
fig_dir = args.fig_dir # set None to disable saving
show_plots = args.show_plots
####
fname_dir = path.dirname(fname)
fname_dir = args.data_dir
antennas_fname = path.join(fname_dir, beacon.antennas_fname)
time_diffs_fname = 'time_diffs.hdf5' if not True else antennas_fname

14
simulations/airshower_beacon_simulation/da_reconstruction.py
View file

@ -31,10 +31,16 @@ if __name__ == "__main__":
from scriptlib import MyArgumentParser
parser = MyArgumentParser()
parser.add_argument('--input-fname', type=str, default=None, help='Path to mysim.sry, either directory or path. If empty it takes DATA_DIR and appends mysim.sry. (Default: %(default)s)')
args = parser.parse_args()
fname = "ZH_airshower/mysim.sry"
figsize = (9,6)
if not args.input_fname:
args.input_fname = args.data_dir
if path.isdir(args.input_fname):
args.input_fname = path.join(args.input_fname, "mysim.sry")
figsize = (12,8)
fig_dir = args.fig_dir
fig_subdir = path.join(fig_dir, 'reconstruction')
@ -43,7 +49,7 @@ if __name__ == "__main__":
remove_beacon_from_traces = True
####
fname_dir = path.dirname(fname)
fname_dir = args.data_dir
antennas_fname = path.join(fname_dir, beacon.antennas_fname)
pickle_fname = path.join(fname_dir, 'res.pkl')
tx_fname = path.join(fname_dir, beacon.tx_fname)
@ -58,7 +64,7 @@ if __name__ == "__main__":
_, tx, antennas = beacon.read_beacon_hdf5(antennas_fname)
_, __, txdata = beacon.read_tx_file(tx_fname)
# Read original REvent
ev = REvent(fname)
ev = REvent(args.input_fname)
# .. patch in our antennas
ev.antennas = antennas

4
simulations/airshower_beacon_simulation/db_longitudinal_figure.py
View file

@ -28,13 +28,11 @@ if __name__ == "__main__":
parser = MyArgumentParser()
args = parser.parse_args()
fname = "ZH_airshower/mysim.sry"
fig_dir = args.fig_dir
show_plots = args.show_plots
####
fname_dir = path.dirname(fname)
fname_dir = args.data_dir
antennas_fname = path.join(fname_dir, beacon.antennas_fname)
pickle_fname = path.join(fname_dir, 'res.pkl')

14
simulations/airshower_beacon_simulation/dc_grid_power_time_fixes.py
View file

@ -32,6 +32,7 @@ if __name__ == "__main__":
from scriptlib import MyArgumentParser
parser = MyArgumentParser()
parser.add_argument('--input-fname', type=str, default=None, help='Path to mysim.sry, either directory or path. If empty it takes DATA_DIR and appends mysim.sry. (Default: %(default)s)')
group = parser.add_argument_group('figures')
for case in valid_cases:
@ -39,13 +40,18 @@ if __name__ == "__main__":
args = parser.parse_args()
if not args.input_fname:
args.input_fname = args.data_dir
if path.isdir(args.input_fname):
args.input_fname = path.join(args.input_fname, "mysim.sry")
wanted_cases = args.figures
if not wanted_cases or 'all' in wanted_cases:
wanted_cases = valid_cases
fname = "ZH_airshower/mysim.sry"
figsize = (9,6)
figsize = (12,8)
fig_dir = args.fig_dir
show_plots = args.show_plots
@ -54,7 +60,7 @@ if __name__ == "__main__":
apply_signal_window_from_max = True
####
fname_dir = path.dirname(fname)
fname_dir = args.data_dir
antennas_fname = path.join(fname_dir, beacon.antennas_fname)
pickle_fname = path.join(fname_dir, 'res.pkl')
tx_fname = path.join(fname_dir, beacon.tx_fname)
@ -67,7 +73,7 @@ if __name__ == "__main__":
_, tx, antennas = beacon.read_beacon_hdf5(antennas_fname)
_, __, txdata = beacon.read_tx_file(tx_fname)
# Read original REvent
ev = REvent(fname)
ev = REvent(args.input_fname)
bak_ants = ev.antennas
# .. patch in our antennas
ev.antennas = antennas

2
simulations/airshower_beacon_simulation/figures/.gitignore vendored
View file

@ -1,2 +0,0 @@
*
!.gitignore

2
simulations/airshower_beacon_simulation/figures/periods_from_shower_figures/shifts/.gitignore vendored
View file

@ -1,2 +0,0 @@
*
!.gitignore

20
simulations/airshower_beacon_simulation/scriptlib.py
View file

@ -4,9 +4,14 @@ Some preconfigured ArgumentParser
from argparse import ArgumentParser
def MyArgumentParser(default_fig_dir='./figures', default_show_plots=False, **kwargs):
def MyArgumentParser(
default_fig_dir='./figures',
default_show_plots=False,
default_data_dir='./ZH_airshower',
**kwargs):
"""
A somewhat preconfigured ArgumentParser
A somewhat preconfigured ArgumentParser to be shared across
multiple scripts.
Set show_plots=True to by default enable showing plots.
Likewise, set fig_dir=None to by default disable saving figures.
@ -14,11 +19,14 @@ def MyArgumentParser(default_fig_dir='./figures', default_show_plots=False, **kw
parser = ArgumentParser(**kwargs)
# Whether to show plots
parser.add_argument('--show-plots', action='store_true')
parser.add_argument('--no-show-plots', dest='show-plots', action='store_false')
parser.set_defaults(show_plots=default_show_plots)
group1 = parser.add_mutually_exclusive_group(required=False)
group1.add_argument('--show-plots', action='store_true', default=default_show_plots, help='Default: %(default)s')
group1.add_argument('--no-show-plots', dest='show-plots', action='store_false')
# Data directory
parser.add_argument('--data-dir', type=str, default=default_data_dir, help='Path to Data Directory. (Default: %(default)s)')
# Figures directory
parser.add_argument('--fig-dir', type=str, default=default_fig_dir)
parser.add_argument('--fig-dir', type=str, default=default_fig_dir, help='Set None to disable saving figures. (Default: %(default)s)')
return parser

5
simulations/airshower_beacon_simulation/view_beaconed_antenna.py
View file

@ -27,8 +27,7 @@ if __name__ == "__main__":
args = parser.parse_args()
fname = "ZH_airshower/mysim.sry"
figsize = (9,6)
figsize = (12,8)
plot_ft_amplitude = args.ft
plot_geometry = args.geom
@ -40,7 +39,7 @@ if __name__ == "__main__":
args.polarisations = ['x','y', 'z']
####
fname_dir = path.dirname(fname)
fname_dir = args.data_dir
antennas_fname = path.join(fname_dir, beacon.antennas_fname)
tx_fname = path.join(fname_dir, beacon.tx_fname)